The MacOS 10.12, called Sierra was shipped in November 2016. It seems to be the reason the Hunspell hyphenation in InDesign breaks.
I have described this problem to an engineer in the InDesign team at Adobe and I am hoping they will find a solution to this. Most likely they will have to have Apple help them with that. In the meantime you might be forced to either buy a comercial hyphenation plug-in for InDesign or downgrade to system 10.11, called El Capitan.